prefix: mf
use_jit: True
input_dim: 26
output_dim: 489
gc_dims:
- 512
- 512
- 512
fc_dims: 1024
dropout: 0.3
l2_reg: 0.0002
lr: 0.0001
gc_layer: MultiGraphConv
epochs: 50
batch_size: 64
pad_len: 1024
ontology: mf
lm_model_name: trained_models/DeepFRI_LSTM.ckpt
cmap_type: ca
cmap_thresh: 10.0
train_tfrecord_fn: /data/shouzheng/SWISS-MODEL-GO/train/
valid_tfrecord_fn: /data/shouzheng/SWISS-MODEL-GO/valid/
annot_fn: ../data/nrPDB-GO_2019.06.18_annot.tsv
goterms:
- GO:0016681
- GO:0005126
- GO:0008134
- GO:0016168
- GO:0045182
- GO:0004532
- GO:0003918
- GO:0003755
- GO:0004540
- GO:0032559
- GO:0008144
- GO:0019843
- GO:0008320
- GO:0016884
- GO:0016893
- GO:0016151
- GO:0043178
- GO:0004364
- GO:0004180
- GO:0003823
- GO:0008422
- GO:1901982
- GO:0022857
- GO:0019825
- GO:0030234
- GO:0003714
- GO:0051920
- GO:0008658
- GO:0016655
- GO:0034061
- GO:0016614
- GO:0042054
- GO:0008289
- GO:0002020
- GO:0042379
- GO:0070011
- GO:0008236
- GO:0016861
- GO:0003700
- GO:0016651
- GO:0016743
- GO:0004520
- GO:0016301
- GO:0015144
- GO:0030597
- GO:0004713
- GO:0016769
- GO:0017171
- GO:0015078
- GO:0016709
- GO:0050897
- GO:0008483
- GO:0052689
- GO:0019904
- GO:0016638
- GO:0004812
- GO:0005230
- GO:0016829
- GO:0016894
- GO:0019239
- GO:0022829
- GO:1901681
- GO:0098772
- GO:0008009
- GO:0070063
- GO:0070003
- GO:0015079
- GO:0048029
- GO:0008080
- GO:0046812
- GO:0016774
- GO:0008242
- GO:0008170
- GO:0008017
- GO:0016746
- GO:0016857
- GO:0008135
- GO:0004185
- GO:0004536
- GO:0008235
- GO:0101005
- GO:0016825
- GO:0030674
- GO:0004177
- GO:0004722
- GO:0043177
- GO:0019200
- GO:0005319
- GO:0017076
- GO:0016775
- GO:0019842
- GO:0004298
- GO:0072341
- GO:0015925
- GO:0016813
- GO:0051539
- GO:0005249
- GO:0048030
- GO:0005524
- GO:0008810
- GO:0016855
- GO:0008081
- GO:0060090
- GO:0019840
- GO:0051015
- GO:0008198
- GO:0046912
- GO:0009055
- GO:0090079
- GO:0008121
- GO:0004312
- GO:0017069
- GO:0140318
- GO:0004784
- GO:0035639
- GO:0016765
- GO:0016679
- GO:0008238
- GO:0015103
- GO:0004869
- GO:0051087
- GO:0004553
- GO:0038023
- GO:0005344
- GO:0140097
- GO:0018024
- GO:0016721
- GO:0008234
- GO:0031406
- GO:0004112
- GO:0016798
- GO:0016730
- GO:0042887
- GO:0019887
- GO:0004197
- GO:0005509
- GO:0050660
- GO:0016462
- GO:0004550
- GO:0031625
- GO:0034062
- GO:0061629
- GO:0019001
- GO:0016702
- GO:0042393
- GO:0030247
- GO:0008138
- GO:0004402
- GO:0032550
- GO:0015002
- GO:0070180
- GO:0043022
- GO:0003690
- GO:0004386
- GO:0031267
- GO:0019901
- GO:0016817
- GO:0003707
- GO:0008047
- GO:0004518
- GO:0008168
- GO:0005085
- GO:0102567
- GO:0004857
- GO:0005504
- GO:0097599
- GO:0016877
- GO:0015926
- GO:0140104
- GO:0001664
- GO:0042803
- GO:0015631
- GO:0060089
- GO:0004623
- GO:0000981
- GO:0019787
- GO:0032561
- GO:0046789
- GO:0016903
- GO:0042562
- GO:0070851
- GO:0099094
- GO:0008276
- GO:0016410
- GO:0047661
- GO:0140110
- GO:0005096
- GO:0051082
- GO:0016667
- GO:0003697
- GO:0008061
- GO:0030246
- GO:0008233
- GO:0044325
- GO:0031369
- GO:0016879
- GO:0034212
- GO:0004888
- GO:0019208
- GO:0046914
- GO:0008408
- GO:0061783
- GO:0016868
- GO:0019205
- GO:0004089
- GO:0016747
- GO:0016742
- GO:0004519
- GO:0003712
- GO:0005216
- GO:0016891
- GO:0003887
- GO:0016881
- GO:0005262
- GO:0005198
- GO:0003678
- GO:0019900
- GO:0022804
- GO:0016849
- GO:0045296
- GO:0016846
- GO:0017080
- GO:0005525
- GO:0015252
- GO:0005125
- GO:0016833
- GO:0016676
- GO:0005539
- GO:0016705
- GO:0050839
- GO:0016209
- GO:0022803
- GO:0019871
- GO:0008757
- GO:0003924
- GO:1990837
- GO:0016838
- GO:0005267
- GO:0004601
- GO:0061733
- GO:0016776
- GO:0004896
- GO:0019899
- GO:0004252
- GO:0016818
- GO:0036459
- GO:0004549
- GO:0042578
- GO:0016782
- GO:0008092
- GO:0016853
- GO:0032182
- GO:0016830
- GO:0097367
- GO:0017016
- GO:0022853
- GO:0003725
- GO:0003677
- GO:0030546
- GO:0030695
- GO:0003684
- GO:0003954
- GO:0016773
- GO:0044389
- GO:0046906
- GO:0004308
- GO:0005506
- GO:0003779
- GO:0031072
- GO:0016675
- GO:0000049
- GO:0051427
- GO:0003968
- GO:0003777
- GO:0016811
- GO:0019902
- GO:0016741
- GO:0140102
- GO:0016645
- GO:0140375
- GO:0019783
- GO:0030594
- GO:0004672
- GO:0071949
- GO:0061659
- GO:0004725
- GO:0004129
- GO:0016836
- GO:0046933
- GO:0019888
- GO:0061135
- GO:0008083
- GO:0099106
- GO:0051540
- GO:0016772
- GO:0004867
- GO:0008194
- GO:0051537
- GO:0003727
- GO:0030598
- GO:0043565
- GO:0015267
- GO:0016646
- GO:0016799
- GO:0016278
- GO:0042626
- GO:0016783
- GO:0140101
- GO:0016814
- GO:0008800
- GO:0051213
- GO:0004033
- GO:0016701
- GO:0016840
- GO:0001883
- GO:0015035
- GO:0004222
- GO:0042625
- GO:0070279
- GO:0003682
- GO:0004659
- GO:0016725
- GO:0016875
- GO:0005543
- GO:0016597
- GO:0008324
- GO:0022834
- GO:0001067
- GO:0004807
- GO:0022832
- GO:0022835
- GO:0005179
- GO:0050145
- GO:0005507
- GO:0016279
- GO:0061630
- GO:0016859
- GO:0032555
- GO:0015318
- GO:0030554
- GO:0070008
- GO:0004497
- GO:0016758
- GO:0016812
- GO:0060589
- GO:0016810
- GO:0030414
- GO:0016668
- GO:0016661
- GO:0050136
- GO:0008237
- GO:0017048
- GO:0015276
- GO:0016788
- GO:0015288
- GO:0016835
- GO:0090729
- GO:0016684
- GO:0019865
- GO:0032549
- GO:0004674
- GO:0102568
- GO:0016722
- GO:0016248
- GO:0003743
- GO:0008200
- GO:0004714
- GO:0019104
- GO:0008201
- GO:0070001
- GO:0051536
- GO:0000977
- GO:0140297
- GO:0019213
- GO:0022836
- GO:0010181
- GO:0003713
- GO:0042802
- GO:0016874
- GO:0019199
- GO:0019829
- GO:0070566
- GO:0046983
- GO:0046982
- GO:0008270
- GO:0051287
- GO:0004175
- GO:0015075
- GO:0016790
- GO:0017137
- GO:0008094
- GO:0046527
- GO:0016628
- GO:0015929
- GO:0015077
- GO:0016796
- GO:0008171
- GO:0003735
- GO:0033293
- GO:0000287
- GO:0005261
- GO:0004521
- GO:0016887
- GO:0008374
- GO:0016779
- GO:0016888
- GO:0008175
- GO:0005102
- GO:0017056
- GO:0016997
- GO:0036361
- GO:0016831
- GO:0003774
- GO:0000976
- GO:0022890
- GO:0050661
- GO:0035091
- GO:0015291
- GO:0003899
- GO:0003724
- GO:0016854
- GO:0008173
- GO:0008199
- GO:0140098
- GO:0005516
- GO:0016791
- GO:0061134
- GO:0015085
- GO:0005215
- GO:0016832
- GO:1904680
- GO:0047429
- GO:0016866
- GO:0070403
- GO:0043021
- GO:0016298
- GO:0048018
- GO:0001882
- GO:0016896
- GO:0005496
- GO:0017111
- GO:0030545
- GO:0022824
- GO:0004866
- GO:0004620
- GO:0020037
- GO:0008066
- GO:0008509
- GO:0033218
- GO:0005244
- GO:0016860
- GO:0048038
- GO:0044877
- GO:0042277
- GO:0004527
- GO:0030170
- GO:0070492
- GO:0016757
- GO:0003746
- GO:0003916
- GO:0030145
- GO:0022884
- GO:0016627
- GO:0003723
- GO:0019207
- GO:0004930
- GO:0097747
- GO:0005088
- GO:0016763
- GO:0003796
- GO:0008137
- GO:0008649
- GO:0022843
- GO:0004721
- GO:0015036
- GO:0140096
- GO:0016247
- GO:0046873
- GO:0034987
- GO:0051020
- GO:0015399
- GO:0004190
- GO:0016407
- GO:0016616
- GO:0004842
- GO:0004970
- GO:0016620
- GO:0003729
- GO:0032553
gonames:
- oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome
     as acceptor
- cytokine receptor binding
- transcription factor binding
- chlorophyll binding
- translation regulator activity
- exoribonuclease activity
- DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
- peptidyl-prolyl cis-trans isomerase activity
- ribonuclease activity
- adenyl ribonucleotide binding
- drug binding
- rRNA binding
- protein transmembrane transporter activity
- carbon-nitrogen ligase activity, with glutamine as amido-N-donor
- endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing
     5'-phosphomonoesters
- nickel cation binding
- alcohol binding
- glutathione transferase activity
- carboxypeptidase activity
- antigen binding
- beta-glucosidase activity
- maltose binding
- transmembrane transporter activity
- oxygen binding
- enzyme regulator activity
- transcription corepressor activity
- peroxiredoxin activity
- penicillin binding
- oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
- DNA polymerase activity
- oxidoreductase activity, acting on CH-OH group of donors
- histone methyltransferase activity
- lipid binding
- protease binding
- chemokine receptor binding
- peptidase activity, acting on L-amino acid peptides
- serine-type peptidase activity
- intramolecular oxidoreductase activity, interconverting aldoses and ketoses
- DNA-binding transcription factor activity
- oxidoreductase activity, acting on NAD(P)H
- carboxyl- or carbamoyltransferase activity
- endodeoxyribonuclease activity
- kinase activity
- carbohydrate transmembrane transporter activity
- RNA glycosylase activity
- protein tyrosine kinase activity
- transferase activity, transferring nitrogenous groups
- serine hydrolase activity
- proton transmembrane transporter activity
- oxidoreductase activity, acting on paired donors, with incorporation or reduction
     of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
- cobalt ion binding
- transaminase activity
- carboxylic ester hydrolase activity
- protein domain specific binding
- oxidoreductase activity, acting on the CH-NH2 group of donors
- aminoacyl-tRNA ligase activity
- extracellular ligand-gated ion channel activity
- lyase activity
- endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing
     3'-phosphomonoesters
- deaminase activity
- wide pore channel activity
- sulfur compound binding
- molecular function regulator
- chemokine activity
- RNA polymerase binding
- threonine-type peptidase activity
- potassium ion transmembrane transporter activity
- monosaccharide binding
- N-acetyltransferase activity
- host cell surface binding
- phosphotransferase activity, carboxyl group as acceptor
- omega peptidase activity
- N-methyltransferase activity
- microtubule binding
- transferase activity, transferring acyl groups
- racemase and epimerase activity, acting on carbohydrates and derivatives
- translation factor activity, RNA binding
- serine-type carboxypeptidase activity
- deoxyribonuclease activity
- metalloexopeptidase activity
- ubiquitinyl hydrolase activity
- hydrolase activity, acting on acid phosphorus-nitrogen bonds
- protein-macromolecule adaptor activity
- aminopeptidase activity
- protein serine/threonine phosphatase activity
- organic acid binding
- carbohydrate kinase activity
- lipid transporter activity
- purine nucleotide binding
- phosphotransferase activity, nitrogenous group as acceptor
- vitamin binding
- threonine-type endopeptidase activity
- modified amino acid binding
- galactosidase activity
- hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear
     amidines
- 4 iron, 4 sulfur cluster binding
- voltage-gated potassium channel activity
- disaccharide binding
- ATP binding
- cellulase activity
- racemase and epimerase activity, acting on amino acids and derivatives
- phosphoric diester hydrolase activity
- molecular adaptor activity
- isoprenoid binding
- actin filament binding
- ferrous iron binding
- transferase activity, transferring acyl groups, acyl groups converted into alkyl
     on transfer
- electron transfer activity
- translation regulator activity, nucleic acid binding
- ubiquinol-cytochrome-c reductase activity
- fatty acid synthase activity
- snRNA binding
- protein transporter activity
- superoxide dismutase activity
- purine ribonucleoside triphosphate binding
- transferase activity, transferring alkyl or aryl (other than methyl) groups
- oxidoreductase activity, acting on diphenols and related substances as donors
- exopeptidase activity
- inorganic anion transmembrane transporter activity
- cysteine-type endopeptidase inhibitor activity
- chaperone binding
- hydrolase activity, hydrolyzing O-glycosyl compounds
- signaling receptor activity
- oxygen carrier activity
- catalytic activity, acting on DNA
- histone-lysine N-methyltransferase activity
- oxidoreductase activity, acting on superoxide radicals as acceptor
- cysteine-type peptidase activity
- carboxylic acid binding
- cyclic-nucleotide phosphodiesterase activity
- hydrolase activity, acting on glycosyl bonds
- oxidoreductase activity, acting on iron-sulfur proteins as donors
- amide transmembrane transporter activity
- protein kinase regulator activity
- cysteine-type endopeptidase activity
- calcium ion binding
- flavin adenine dinucleotide binding
- pyrophosphatase activity
- nucleoside diphosphate kinase activity
- ubiquitin protein ligase binding
- 5'-3' RNA polymerase activity
- RNA polymerase II-specific DNA-binding transcription factor binding
- guanyl nucleotide binding
- oxidoreductase activity, acting on single donors with incorporation of molecular
     oxygen, incorporation of two atoms of oxygen
- histone binding
- polysaccharide binding
- protein tyrosine/serine/threonine phosphatase activity
- histone acetyltransferase activity
- purine ribonucleoside binding
- heme-copper terminal oxidase activity
- large ribosomal subunit rRNA binding
- ribosome binding
- double-stranded DNA binding
- helicase activity
- small GTPase binding
- protein kinase binding
- hydrolase activity, acting on acid anhydrides
- steroid hormone receptor activity
- enzyme activator activity
- nuclease activity
- methyltransferase activity
- guanyl-nucleotide exchange factor activity
- phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine)
- enzyme inhibitor activity
- fatty acid binding
- xylanase activity
- ligase activity, forming carbon-sulfur bonds
- glucosidase activity
- molecular carrier activity
- G protein-coupled receptor binding
- protein homodimerization activity
- tubulin binding
- molecular transducer activity
- phospholipase A2 activity
- DNA-binding transcription factor activity, RNA polymerase II-specific
- ubiquitin-like protein transferase activity
- guanyl ribonucleotide binding
- host cell surface receptor binding
- oxidoreductase activity, acting on the aldehyde or oxo group of donors
- hormone binding
- growth factor receptor binding
- ligand-gated cation channel activity
- protein methyltransferase activity
- N-acyltransferase activity
- amino-acid racemase activity
- transcription regulator activity
- GTPase activator activity
- unfolded protein binding
- oxidoreductase activity, acting on a sulfur group of donors
- single-stranded DNA binding
- chitin binding
- carbohydrate binding
- peptidase activity
- ion channel binding
- translation initiation factor binding
- ligase activity, forming carbon-nitrogen bonds
- peptide N-acetyltransferase activity
- transmembrane signaling receptor activity
- phosphatase regulator activity
- transition metal ion binding
- 3'-5' exonuclease activity
- peptidoglycan muralytic activity
- intramolecular transferase activity, phosphotransferases
- nucleobase-containing compound kinase activity
- carbonate dehydratase activity
- transferase activity, transferring acyl groups other than amino-acyl groups
- hydroxymethyl-, formyl- and related transferase activity
- endonuclease activity
- transcription coregulator activity
- ion channel activity
- endoribonuclease activity, producing 5'-phosphomonoesters
- DNA-directed DNA polymerase activity
- acid-amino acid ligase activity
- calcium channel activity
- structural molecule activity
- DNA helicase activity
- kinase binding
- active transmembrane transporter activity
- phosphorus-oxygen lyase activity
- cadherin binding
- carbon-sulfur lyase activity
- sodium channel regulator activity
- GTP binding
- proton channel activity
- cytokine activity
- oxo-acid-lyase activity
- oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
- glycosaminoglycan binding
- oxidoreductase activity, acting on paired donors, with incorporation or reduction
     of molecular oxygen
- cell adhesion molecule binding
- antioxidant activity
- passive transmembrane transporter activity
- sodium channel inhibitor activity
- S-adenosylmethionine-dependent methyltransferase activity
- GTPase activity
- sequence-specific double-stranded DNA binding
- carbon-oxygen lyase activity, acting on phosphates
- potassium channel activity
- peroxidase activity
- peptide-lysine-N-acetyltransferase activity
- phosphotransferase activity, phosphate group as acceptor
- cytokine receptor activity
- enzyme binding
- serine-type endopeptidase activity
- hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
- thiol-dependent ubiquitinyl hydrolase activity
- tRNA-specific ribonuclease activity
- phosphoric ester hydrolase activity
- transferase activity, transferring sulfur-containing groups
- cytoskeletal protein binding
- isomerase activity
- ubiquitin-like protein binding
- carbon-carbon lyase activity
- carbohydrate derivative binding
- Ras GTPase binding
- active ion transmembrane transporter activity
- double-stranded RNA binding
- DNA binding
- signaling receptor activator activity
- GTPase regulator activity
- damaged DNA binding
- NADH dehydrogenase activity
- phosphotransferase activity, alcohol group as acceptor
- ubiquitin-like protein ligase binding
- tetrapyrrole binding
- exo-alpha-sialidase activity
- iron ion binding
- actin binding
- heat shock protein binding
- oxidoreductase activity, acting on a heme group of donors
- tRNA binding
- hormone receptor binding
- RNA-directed 5'-3' RNA polymerase activity
- microtubule motor activity
- hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear
     amides
- phosphatase binding
- transferase activity, transferring one-carbon groups
- catalytic activity, acting on a rRNA
- oxidoreductase activity, acting on the CH-NH group of donors
- immune receptor activity
- ubiquitin-like protein-specific protease activity
- neurotransmitter receptor activity
- protein kinase activity
- FAD binding
- ubiquitin-like protein ligase activity
- protein tyrosine phosphatase activity
- cytochrome-c oxidase activity
- hydro-lyase activity
- proton-transporting ATP synthase activity, rotational mechanism
- protein phosphatase regulator activity
- endopeptidase regulator activity
- growth factor activity
- ion channel regulator activity
- metal cluster binding
- transferase activity, transferring phosphorus-containing groups
- serine-type endopeptidase inhibitor activity
- UDP-glycosyltransferase activity
- 2 iron, 2 sulfur cluster binding
- single-stranded RNA binding
- rRNA N-glycosylase activity
- sequence-specific DNA binding
- channel activity
- oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
- hydrolase activity, hydrolyzing N-glycosyl compounds
- lysine N-methyltransferase activity
- ATPase-coupled transmembrane transporter activity
- sulfurtransferase activity
- catalytic activity, acting on a tRNA
- hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic
     amidines
- beta-lactamase activity
- dioxygenase activity
- aldo-keto reductase (NADP) activity
- oxidoreductase activity, acting on single donors with incorporation of molecular
     oxygen
- carbon-nitrogen lyase activity
- purine nucleoside binding
- protein disulfide oxidoreductase activity
- metalloendopeptidase activity
- ATPase-coupled ion transmembrane transporter activity
- vitamin B6 binding
- chromatin binding
- prenyltransferase activity
- oxidoreductase activity, acting on CH or CH2 groups
- ligase activity, forming carbon-oxygen bonds
- phospholipid binding
- amino acid binding
- cation transmembrane transporter activity
- ligand-gated channel activity
- regulatory region nucleic acid binding
- triose-phosphate isomerase activity
- voltage-gated channel activity
- transmitter-gated channel activity
- hormone activity
- nucleoside monophosphate kinase activity
- copper ion binding
- protein-lysine N-methyltransferase activity
- ubiquitin protein ligase activity
- cis-trans isomerase activity
- purine ribonucleotide binding
- inorganic molecular entity transmembrane transporter activity
- adenyl nucleotide binding
- serine-type exopeptidase activity
- monooxygenase activity
- transferase activity, transferring hexosyl groups
- hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic
     amides
- nucleoside-triphosphatase regulator activity
- hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
- peptidase inhibitor activity
- oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
- oxidoreductase activity, acting on other nitrogenous compounds as donors
- NADH dehydrogenase (quinone) activity
- metallopeptidase activity
- Rho GTPase binding
- ligand-gated ion channel activity
- hydrolase activity, acting on ester bonds
- porin activity
- carbon-oxygen lyase activity
- toxin activity
- oxidoreductase activity, acting on peroxide as acceptor
- immunoglobulin binding
- ribonucleoside binding
- protein serine/threonine kinase activity
- phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine)
- oxidoreductase activity, oxidizing metal ions
- channel inhibitor activity
- translation initiation factor activity
- ion channel inhibitor activity
- transmembrane receptor protein tyrosine kinase activity
- DNA N-glycosylase activity
- heparin binding
- aspartic-type peptidase activity
- iron-sulfur cluster binding
- RNA polymerase II transcription regulatory region sequence-specific DNA binding
- DNA-binding transcription factor binding
- deacetylase activity
- gated channel activity
- FMN binding
- transcription coactivator activity
- identical protein binding
- ligase activity
- transmembrane receptor protein kinase activity
- ATPase-coupled cation transmembrane transporter activity
- adenylyltransferase activity
- protein dimerization activity
- protein heterodimerization activity
- zinc ion binding
- NAD binding
- endopeptidase activity
- ion transmembrane transporter activity
- thiolester hydrolase activity
- Rab GTPase binding
- DNA-dependent ATPase activity
- glucosyltransferase activity
- oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
- hexosaminidase activity
- monovalent inorganic cation transmembrane transporter activity
- exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing
     5'-phosphomonoesters
- O-methyltransferase activity
- structural constituent of ribosome
- monocarboxylic acid binding
- magnesium ion binding
- cation channel activity
- endoribonuclease activity
- ATPase activity
- O-acyltransferase activity
- nucleotidyltransferase activity
- endodeoxyribonuclease activity, producing 5'-phosphomonoesters
- tRNA methyltransferase activity
- signaling receptor binding
- structural constituent of nuclear pore
- alpha-sialidase activity
- racemase activity, acting on amino acids and derivatives
- carboxy-lyase activity
- motor activity
- transcription regulatory region sequence-specific DNA binding
- inorganic cation transmembrane transporter activity
- NADP binding
- phosphatidylinositol binding
- secondary active transmembrane transporter activity
- DNA-directed 5'-3' RNA polymerase activity
- RNA helicase activity
- racemase and epimerase activity
- RNA methyltransferase activity
- ferric iron binding
- catalytic activity, acting on RNA
- calmodulin binding
- phosphatase activity
- peptidase regulator activity
- calcium ion transmembrane transporter activity
- transporter activity
- aldehyde-lyase activity
- peptide transmembrane transporter activity
- nucleoside-triphosphate diphosphatase activity
- intramolecular transferase activity
- NAD+ binding
- ribonucleoprotein complex binding
- lipase activity
- receptor ligand activity
- nucleoside binding
- exoribonuclease activity, producing 5'-phosphomonoesters
- steroid binding
- nucleoside-triphosphatase activity
- receptor regulator activity
- transmitter-gated ion channel activity
- endopeptidase inhibitor activity
- phospholipase activity
- heme binding
- glutamate receptor activity
- anion transmembrane transporter activity
- amide binding
- voltage-gated ion channel activity
- intramolecular oxidoreductase activity
- quinone binding
- protein-containing complex binding
- peptide binding
- exonuclease activity
- pyridoxal phosphate binding
- oligosaccharide binding
- transferase activity, transferring glycosyl groups
- translation elongation factor activity
- DNA topoisomerase activity
- manganese ion binding
- macromolecule transmembrane transporter activity
- oxidoreductase activity, acting on the CH-CH group of donors
- RNA binding
- kinase regulator activity
- G protein-coupled receptor activity
- RNA polymerase activity
- Ras guanyl-nucleotide exchange factor activity
- transferase activity, transferring pentosyl groups
- lysozyme activity
- NADH dehydrogenase (ubiquinone) activity
- rRNA methyltransferase activity
- voltage-gated cation channel activity
- phosphoprotein phosphatase activity
- disulfide oxidoreductase activity
- catalytic activity, acting on a protein
- channel regulator activity
- metal ion transmembrane transporter activity
- immunoglobulin receptor binding
- GTPase binding
- primary active transmembrane transporter activity
- aspartic-type endopeptidase activity
- acetyltransferase activity
- oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
- ubiquitin-protein transferase activity
- ionotropic glutamate receptor activity
- oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP
     as acceptor
- mRNA binding
- ribonucleotide binding
